Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916071.1_cds_XP_016465754.1_58677
CDS Infomation

[gene=LOC107788588] [db_xref=GeneID:107788588] [protein=patatin-like protein 2] [protein_id=XP_016465754.1] [location=complement(join(24333..24575,24703..25005,25515..25676,25774..25957,26444..26625,26742..26921))] [gbkey=CDS]
Sequence

ATGGGGAGGATTTTCTTAGCAGCACTAACACTGTTAGTAGTGTTCCTTCATGTCCTACAA
CCTTTTATGGTTTCTGCTGCTACAAAAGGAAAGATGGTAACAGTTTTGAGCATAGATGGA
GGTGGCATCAGAGGCATTATTCCTGGCACCCTTCTTGCTTTCCTTGAATCCAAACTTCAG
GAAATTGACGGACCAAATGCAAGAATTGCAGACTATTTTGATGTGGTTGCTGGAACAAGT
ACAGGCGGATTGGTAACAACTATGCTTACAGCCCCAAACAAAGATAACCTCCCTTTATAT
GCAGCAAAAGATATTACCAACTTCTACATGGAGCACAGCCCTAAAATCTTTCCTACGAGC
AGCCGCACCAGATTTGTGGAGAAGTTCTCAAGGATATTTGGGGGGCCAAAGTATGACGGC
AAGTACCTGAGATCATTGGTTAAGTCAACATTAGGCAATCTTACTACCAAGCAGACATTG
ACTGATATAGTCATCCCAACTTTTGATATCAAGCGCCTTCAACCCATAATTTTCACTACC
CTTGATGCAAGAGCAAATGTATCTAAGGATGCGCTACTATCAGACATCTGTCTTGGTACC
TCAGCAGCACCCACTTATTTCCCTGCACACTATTTTGAGACCAAGGATGCTCAAGGGAAA
ACGCATACATTTGATCTTATTGATGGAGGTGTAGCTGCAAATAATCCAACTCTAATGGCA
ATGACTCACGTTATAAAAGAAATGATGAACGGGAAATTCCAATATGAGGGTGTAAAAACC
ATGGACTGCAAGAGAATGTTGGTTCTGTCGCTGGGCACGGGTATAGGCAAGCATGAAGAG
AATTATAACGCAGCCTCAGCTTCAAAATGGGGCTTACTTGGTTGGATGTACAACAATGGT
GCCAGTCCATTGATTGATGTTTATGGTGATGCAAGTGTTGATATTGTGGACATACACCTT
TCCACCATTTTTAAGTCCTTTGGCAGTGAGAAGAATTACCTCAGAATCCAGGATGATAAT
TTGACAGGGGACGCCGCAAATATGGATGTGGCAACCAAAGAAAACATGGAGACACTTGTG
AAGATTGGTAATGATCTATTGAAGAAGCCAGTGTCAAGGGTCAACTTGGAGACAGGACGA
TATGAAGCAGTTCATGGGGAGGGGACTAATGAAGAAGCTATTATCCGTTTTGTTAAGTTG
CTCTCAGAGGAAAGGAAGCTCCGACAACTAACTGACAAGTGTTCTTCGACTTGA

Peptide Sequence

PEP ID

XP_016465754.1
PEP Infomation

PREDICTED: patatin-like protein 2 [Nicotiana tabacum]
Sequence

MGRIFLAALTLLVVFLHVLQPFMVSAATKGKMVTVLSIDGGGIRGIIPGTLLAFLESKLQ
EIDGPNARIADYFDVVAGTSTGGLVTTMLTAPNKDNLPLYAAKDITNFYMEHSPKIFPTS
SRTRFVEKFSRIFGGPKYDGKYLRSLVKSTLGNLTTKQTLTDIVIPTFDIKRLQPIIFTT
LDARANVSKDALLSDICLGTSAAPTYFPAHYFETKDAQGKTHTFDLIDGGVAANNPTLMA
MTHVIKEMMNGKFQYEGVKTMDCKRMLVLSLGTGIGKHEENYNAASASKWGLLGWMYNNG
ASPLIDVYGDASVDIVDIHLSTIFKSFGSEKNYLRIQDDNLTGDAANMDVATKENMETLV
KIGNDLLKKPVSRVNLETGRYEAVHGEGTNEEAIIRFVKLLSEERKLRQLTDKCSST

Transcript Sequence

Gene sequence data has not been registered.